Project 3: Defining the antibody landscape after SARS-CoV-2 infection

NIH Pandemic-Era Grants

Pandemic Era Grants

2022

Document text

Principal Investigator: SABRA L. KLEIN
Organization: JOHNS HOPKINS UNIVERSITY
Fiscal Year: 2022
Award: $432,172
Funding agency: National Cancer Institute

Research Project 3 Summary
There are insufficient data regarding the long-term humoral immune responses induced after SARS-CoV-2
infection. Our preliminary data indicate that there is variation in the magnitude and duration of antibody
responses following SARS-CoV-2 infection. While IgG and IgA antibodies against spike (S) and the receptor
binding domain of S (S-RBD) appear to remain constant over time, neutralizing antibody (nAb) titers wane and
are not detected in up to 25% of infected individuals who have detectable anti-S and anti-S-RBD antibodies.
We have also observed that during the convalescent phase of SARS-CoV-2 infection, individuals with more
severe COVID-19 (i.e., hospitalized, older, and male patients) have significantly greater serological responses
to SARS-CoV-2. The antibody responses mediating protection from re-infection are not defined, and neither
are responses that may mediate greater pathology. From studies of other viruses, it is clear that a variety of
antibody functions contribute to protection from re-infection and modulate disease severity. Both nAbs and
non-nAbs can mediate a number of different activities, which include complement activation and antibody-
dependent cellular cytotoxicity (ADCC), which may contribute to pathogenesis as well as protections from
SARS-CoV-2. The overarching goal of JH-EPICS Research Project 3 is to analyze the magnitude and duration
of the total as well as functional antibody responses after SARS-CoV-2 infection. We have developed a core
set of serological assays to be applied to a prospective, demographically diverse cohort of hospitalized patients
presenting with mild, moderate, and severe COVID-19 disease. Plasma samples have and will continue to be
collected at multiple timepoints from enrollment through one year post-enrollment. Aim 1 will systematically
evaluate antibody isotype switching and the subclasses and quality of the immunoglobulins (IgG, IgM, and IgA
[monomeric and dimeric]) that recognize the SARS-CoV-2 S and S-RBD. Aim 2 will characterize the kinetics
and duration of the neutralizing antibody response against SARS-CoV-2 and the ability of viruses to escape
from nAbs. Finally, Aim 3 will analyze the function of non-neutralizing SARS-CoV-2-specific serological
response by assessing ADCC, complement-mediated cytotoxicity, and complement fixation activity toward
SARS-CoV-2 virus particles and virus-infected cells. Using linear regression analyses and modeling of these
data in the context of clinical and demographic information, we are uniquely positioned to determine the
modifiers that drive a protective antibody response following SARS-CoV-2 infection or, eventually, vaccination.

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global pandemic><COVID19 health crisis><COVID19 immune response><COVID19 infection><COVID19 pandemic><COVID19 patient><COVID19 positive patient><COVID19 public health crisis><COVID19 spike glycoprotein><COVID19 spike protein><COVID19 virus><Cell Body><Cells><Characteristics><Class Switching><Class Switchings><Clinical><CoV-2><CoV2><Complement><Complement Activation><Complement Proteins><Complement-Dependent Cytotoxicity><Data><Disease><Disorder><Enrollment><Fixation><Goals><IgA><IgG><IgM><Immune Globulins><Immune response><Immunity><Immunoglobulin A><Immunoglobulin Class Switching><Immunoglobulin Class Switchings><Immunoglobulin G><Immunoglobulin M><Immunoglobulins><Immunological response><Individual><Infection><Investigators><Isotype Switching><Isotype Switchings><Kinetics><Linear Regressions><Measures><Mediating><Methods><Modeling><Pathogenesis><Pathology><Patients><Phase><Plasma><Plasma Serum><Population><Position><Positioning Attribute><Prospective cohort><Proteins><Public 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epidemic><SARS-coronavirus-2 pandemic><SARS-related corona virus 2><SARS-related coronavirus 2><SARSCoV2><Sampling><Serology><Serology test><Serum><Severe Acute Respiratory Coronavirus 2><Severe Acute Respiratory Distress Syndrome CoV 2><Severe Acute Respiratory Distress Syndrome Corona Virus 2><Severe Acute Respiratory Distress Syndrome Coronavirus 2><Severe Acute Respiratory Syndrome CoV 2><Severe Acute Respiratory Syndrome CoV 2 epidemic><Severe Acute Respiratory Syndrome CoV 2 pandemic><Severe Acute Respiratory Syndrome-associated coronavirus 2><Severe Acute Respiratory Syndrome-related coronavirus 2><Severe acute respiratory syndrome associated corona virus 2><Severe acute respiratory syndrome corona virus 2><Severe acute respiratory syndrome coronavirus 2><Severe acute respiratory syndrome coronavirus 2 S protein><Severe acute respiratory syndrome coronavirus 2 epidemic><Severe acute respiratory syndrome coronavirus 2 immune response><Severe acute respiratory syndrome coronavirus 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