General Linear Modeling For Magnetic Resonance Spectroscopy
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Principal Investigator: Georg Oeltzschner Organization: JOHNS HOPKINS UNIVERSITY Fiscal Year: 2024 Award: $245,254 Funding agency: National Institute of Biomedical Imaging and Bioengineering Project Summary Advanced multi-spectrum magnetic resonance spectroscopy (MRS) methods allow the non-invasive measurement of the concentration of neurochemicals, but also of other biophysical properties. The currently available one-dimensional modeling tools cannot adequately model such data because they are incapable of incorporating prior knowledge about the relationships between sub-spectra into a single multi-dimensional model. Additional parameters that can be encoded in the acquisition, but not adequately accommodated within the quantification model include metabolite relaxation times, metabolite diffusion tensors, and physiological metabolic response to external stimulation. This project addresses the gap in currently available modeling tools for MRS by introducing a generalized linear combination modeling framework for MRS. This avoids the overfitting that arises from serial application of current one-dimensional models, dramatically increasing model parsimony. All code developed will be made available to the community open-source, and the modeling framework will be made available in the cloud via a web user interface. Terms: <Address><Adoption><Algorithms><Behavior><Biochemical><Body Tissues><Brain><Brain Nervous System><Cell Communication and Signaling><Cell Signaling><Cloud Computing><Cloud Infrastructure><Code><Coding System><Communities><Computer Models><Computerized Models><Concentration measurement><Coupled><Data><Diffusion><Elements><Encephalon><Equipment><Event><Fingerprint><Freedom><Grant><High Performance Computing><High-dimensional Modeling><Human><Individual><Internet><Intracellular Communication and Signaling><Knowledge><Liberty><Linear Models><Link><MR Spectroscopy><Magnetic Resonance Spectroscopy><Measures><Metabolic><Methods><Modeling><Modern Man><Modernization><Participant><Pathology><Phase><Physiologic><Physiologic pulse><Physiological><Property><Pulse><Recovery><Relaxation><Resolution><Running><Series><Signal Transduction><Signal Transduction Systems><Signaling><Spectroscopy><Spectrum Analyses><Spectrum Analysis><Stimulus><Techniques><Testing><Time><Tissues><Translating><WWW><biological signal transduction><biophysical characteristics><biophysical characterization><biophysical measurement><biophysical parameters><biophysical properties><candidate biomarker><candidate marker><cell type><chemical property><cloud based><cloud based computing><cloud computer><computational modeling><computational models><computer based models><computerized modeling><density><design><designing><diffused><diffuses><diffusing><diffusion weighted><diffusions><experiment><experimental research><experimental study><experiments><flexibility><flexible><high-end computing><improved><in vivo><in vivo magnetic resonance spectroscopy><innovate><innovation><innovative><model design><multidimensional modeling><neurochemical><neurochemistry><novel><open source><pharmacologic><physical property><potential biological marker><potential biomarker><resolutions><response><tool><user-friendly><web><world wide web>