Establishing a novel gene editing strategy for BBS7 using human retinal organoids

NIH Pandemic-Era Grants

Pandemic Era Grants

2022

Document text

Principal Investigator: Kathleen R Chirco
Organization: OREGON HEALTH & SCIENCE UNIVERSITY
Fiscal Year: 2022
Award: $89,524
Funding agency: National Eye Institute

PROJECT SUMMARY/ABSTRACT
As the leading cause of inherited retinal degeneration, retinitis pigmentosa (RP) affects about 1.5 million people
worldwide. Bardet-Biedl syndrome (BBS) is the second most common causes of syndromic RP, and is
characterized as an autosomal recessive ciliopathy with severe photoreceptor degeneration occurring by the first
or second decade of life. BBS has been linked to variants in 21 genes, with those in BBS7 accounting for roughly
2% of all BBS cases. The overall goal of this proposal is to overcome two major hurdles in vision research: (1)
the ability to accurately recapitulate disease mechanisms and progression for BBS7 in a translatable model
system, and (2) the ability to permanently correct disease-causing variants and restore photoreceptor cell
function with high efficiency and specificity. In Aim 1, disease mechanisms responsible for the onset of BBS7
will be examined by generating a retinal organoid model system from human induced pluripotent stem cells
harboring disease-causing mutations in the BBS7 gene. In Aims 2 and 3, BBS7 variants will be corrected using
prime editing tools and a lipid nanoparticle (LNP)-based delivery strategy within the human retinal organoid
model to study timing and efficiency of disease rescue. Furthermore, the therapies found to be most effective in
vitro will be tested in nonhuman primates to determine dose, immunogenicity, and efficiency of Cas9 delivery
into photoreceptor cells in vivo. Successful completion of these aim will 1) contribute to our basic understanding
of the pathophysiological mechanisms underlying photoreceptor dysfunction in BBS7, 2) provide the field with a
thorough evaluation of a targeted gene editing strategy to treat BBS7 in the retina, and 3) establish LNPs as an
ideal delivery system to limit cytotoxic and immunologic side effects commonly observed with AAV-based
delivery methods. Taken together, this work will establish a pipeline for testing and optimization of therapies to
treat BBS7 and other inherited retinal diseases, including additional forms of BBS as well as RP.

Terms: <Accounting><Affect><Bardet Biedel syndrome><Bardet-Biedl Syndrome><Biologic Models><Biological Models><CRISPR approach><CRISPR based approach><CRISPR method><CRISPR methodology><CRISPR technique><CRISPR technology><CRISPR tools><CRISPR-CAS-9><CRISPR-based method><CRISPR-based technique><CRISPR-based technology><CRISPR-based tool><CRISPR/CAS approach><CRISPR/Cas method><CRISPR/Cas technology><CRISPR/Cas9><CRISPR/Cas9 technology><Cas nuclease technology><Cell Body><Cell Function><Cell Process><Cell physiology><Cells><Cellular Function><Cellular Physiology><Cellular Process><Cilia><Clinic><Clustered Regularly Interspaced Short Palindromic Repeats approach><Clustered Regularly Interspaced Short Palindromic Repeats method><Clustered Regularly Interspaced Short Palindromic Repeats methodology><Clustered Regularly Interspaced Short Palindromic Repeats technique><Clustered Regularly Interspaced Short Palindromic Repeats technology><Complex><Defect><Development><Disease><Disease Progression><Disease model><Disorder><Dose><Dysfunction><Evaluation><Formulation><Functional disorder><Future><Gene variant><Generalized Growth><Genes><Genetic Alteration><Genetic Change><Genetic defect><Goals><Growth><Hereditary><Human><Immunochemical Immunologic><Immunologic><Immunological><Immunologically><Immunologics><In Vitro><Individual><Inherited><Investigation><Knowledge><Lead><Life><Link><Measures><Mediating><Membrane><Mentors><Methods><Mitotic><Model System><Modeling><Modern Man><Modification><Morphogenesis><Mutation><Organoids><Pb element><Persons><Phenotype><Photoreceptor Cell><Photoreceptors><Photosensitive Cell><Physiopathology><Pigmentary Retinopathy><Protein Trafficking><Retina><Retinal Degeneration><Retinal Diseases><Retinal Disorder><Retinitis Pigmentosa><Safety><Specificity><Subcellular Process><Syndrome><System><Tapetoretinal Degeneration><Testing><Therapeutic><TimeLine><Tissue Growth><Training><Translational Research><Translational Science><Validation><Variant><Variation><Viral Vector><Vision research><Visual Receptor><Work><allele variant><allelic variant><base><career><ciliopathy><cytotoxic><degenerative retina diseases><developmental><disease phenotype><disease-causing mutation><disorder model><effective therapy><effective treatment><experience><experiment><experimental research><experimental study><gene therapeutics><gene-based therapeutic><gene-based therapeutics><genes therapeutic><genes therapeutics><genetic recessive><genetic variant><genome editing><genome mutation><genomic editing><genomic variant><heavy metal Pb><heavy metal lead><iPS><iPSC><iPSCs><immunogenicity><improved><in vivo><induced pluripotent stem cell><inducible pluripotent stem cell><inherited retinal degeneration><lipid based nanoparticle><lipid nanoparticle><membrane structure><morphogenetic process><nano particle delivery><nanoparticle delivered><nanoparticle delivery><non-human primate><nonhuman primate><novel><ontogeny><optimal therapies><optimal treatments><pathophysiology><photoreceptor degeneration><prevent><preventing><prime editing><prime editor><protein transport><recessive genetic trait><recessive trait><retina degeneration><retina disease><retina disorder><retinal degenerative><retinal degenerative diseases><retinopathy><rod-cone dystrophy><side effect><therapeutic gene><therapy optimization><tool><translation research><translational model><treatment optimization>