Development of a high precision and high order DNA counting platform
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Principal Investigator: Eleen Yee Lam Shum Organization: ENUMERIX, INC. Fiscal Year: 2024 Award: $824,307 Funding agency: National Institute of General Medical Sciences PROJECT SUMMARY/ABSTRACT Enumerix has developed a cost-effective method to perform high order DNA counting at high precision called direct count PCR (dcPCR). dcPCR uses a spin column method that generates millions of partitions directly into PCR tubes for target amplification, using standard laboratory centrifuge and thermal cyclers, followed by an ultra-rapid method to count up to 1 million copies of DNA directly from the same PCR tube. We have demonstrated that our technology far exceeds the precision of digital PCR, and can perform at a DNA counting range akin to quantitative PCR and next generation sequencing, which makes it a suitable next-generation DNA counting platform. For this proposed Phase II project we plan to further develop our dcPCR platform with the goal to distribute the technology to end-users to replace quantitative PCR and digital PCR. Terms: <3-D><3-Dimensional><3D><Architecture><COVID test><COVID tests><COVID-19 test><COVID-19 tests><COVID19 test><COVID19 tests><Cell Communication and Signaling><Cell Signaling><Centrifugation><Centrifugation Fractionation><Chemistry><Coupled><DNA><DNA Molecular Biology><Data><Deoxyribonucleic Acid><Deposit><Deposition><Detection><Development><Device or Instrument Development><Emulsions><Engineering / Architecture><Gene Expression Monitoring><Gene Expression Pattern Analysis><Gene Expression Profiling><Goals><Industry><Intracellular Communication and Signaling><Laboratories><Light><Measurement><Methods><Molecular Biology><Mutation Detection><NGS Method><NGS system><Noise><Non-Polyadenylated RNA><Oligo><Oligonucleotides><Optics><Phase><Photoradiation><Position><Positioning Attribute><Production><RNA><RNA Gene Products><Reagent><Ribonucleic Acid><SARS-CoV-2 test><SARS-CoV-2 tests><Sampling><Scanning><Signal Transduction><Signal Transduction Systems><Signaling><Speed><Survey Instrument><Surveys><System><Techniques><Technology><Testing><Transcript Expression Analyses><Transcript Expression Analysis><Tube><Work><analyze gene expression><biological signal transduction><coronavirus disease 2019 test><coronavirus disease 2019 tests><coronavirus disease test><coronavirus disease tests><coronavirus test><coronavirus tests><cost><cost effective><design><designing><develop software><developing computer software><developmental><device development><digital><gene expression analysis><gene expression assay><imager><improved><instrument><instrument development><liquid biopsy><manufacturability><molecular diagnostics><multiplex detection><next gen sequencing><next generation><next generation sequencing><nextgen sequencing><oligos><optical><prototype><rapid method><rapid technique><rare allele><rare mutation><rare variant><severe acute respiratory syndrome coronavirus 2 test><severe acute respiratory syndrome coronavirus 2 tests><software development><stability testing><test for COVID><three dimensional><tool><transcriptional profiling><usability><web tool><web-based tool>