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VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
Doc. Alias: NA
PFIZER CO NFIDENTIAL
Page 1
TABLE OF CONTENTS
LIST OF TABLES ................................ ................................ ................................ ..................... 2
LIST OF FIGURES ................................ ................................ ................................ ................... 2
1.HISTORICAL REVI SIONSUMMARY ................................ ................................ ..............3
2.PURPOSE ................................ ................................ ................................ .............................. 3
3.SCOPE................................ ................................ ................................ ................................ ...3
4.GLOSSARY ................................ ................................ ................................ .......................... 3
5.GENERAL ................................ ................................ ................................ ............................. 4
6.RESPONSIBILIT IES................................ ................................ ................................ ............4
7.SAFETY ................................ ................................ ................................ ................................ 5
8.MATERIAL S/EQUIPMENT ................................ ................................ ................................ 5
8.1. Equipment................................ ................................ ................................ ................. 5
8.2.Materials ................................ ................................ ................................ .................... 6
8.3.Reagents................................ ................................ ................................ .................... 7
8.3.1.Standard and QCS, Prepared as Described in VR -RGR-RS-10747............. 7
8.3.2.Microspheres ................................ ................................ ................................ .7
8.3.3.Secondary Antibody ................................ ................................ ..................... 7
8.3.4. ................................ ................................ ................................ ...............7
8.3.5.Buffers................................ ................................ ................................ ..........7
9.PROCEDURE ................................ ................................ ................................ ........................ 8
9.1.Preparation of Single-plex S1 Microspheres ................................ ............................. 9
9.2.Preparation of Sample Dilution Plates ................................ ................................ ......9
9.2.1.Robotic Preparation of Dilution Plates ................................ ......................... 9
9.2.2. Manual Preparation of Dilution Plates................................ ....................... 10
9.2.2.1.Reference Standard ................................ ................................ ...10
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FDA-CBER-2021-5683-1072938
VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
Doc. Alias: NA
PFIZER CO NFIDENTIAL
Page 29.2.2.2. Unknown Specimen and QCS................................ ................... 11
9.2.2.3.Samples Requiring Pre -dilutions................................ ...............11
9.2.2.4.Dilution Plate Completion ................................ ......................... 12
9.3.Preparation of Assay Plates ................................ ................................ ..................... 12
9.3.1.Robotic Preparation of Assay Plates................................ ........................... 12
9.3.2.Manual Preparation of Assay Plates................................ ........................... 12
9.4.Primary Incubation of S1 Coated M icrospheres with Sera ................................ .....12
9.5.Preparation of Plate Washer ................................ ................................ .........13
9.6.PE-conjugated Secondary Antibody Preparation and Incubation ........................... 13
9.7.Assay Completion ................................ ................................ ................................ ...14
9.8.Reading Assay Plates on the Bio -Plex I nstrument ................................ ...........14
9.9.Rereading of Assay Plates Due to Errors ................................ ................................ 15
9.10.Electronic Documentation ................................ ................................ ..................... 15
9.11.Data Export and Primary Data Review ................................ ................................ .16
10.INTERPRETATION OF R ESULTS ................................ ................................ ................. 16
11.REFERENCES ................................ ................................ ................................ .................. 17
12.DOCUMENT V ERSION MODIFICATIONS ................................ ................................ ..18
12.1.CRIF Number: VR -CRIF-20-14611................................ ................................ .....18
LIST OF TABLES
Table1. Chronological Summary of Previous Versions................................ ..........3
Table 2. Vaccine Research Functional Units ................................ ............................ 3
Table3. Termsand Definitions ................................ ................................ ................ 3
Table4. Roles and Responsibilities................................ ................................ ..........5
Table 5. General References ................................ ................................ ................... 17
Table 6. Form References ................................ ................................ ....................... 17
Table 7. Specific References ................................ ................................ .................. 17
Table 8. Detailed Changes ................................ ................................ ...................... 18
LIST OF FI GURES
Figure1. Dilution Plate Diagram ................................ ................................ .............10
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VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
Doc. Alias: NA
PFIZER CO NFIDENTIAL
Page 31.HISTORICAL REVISION SUMMARY
Table 1.Chronological Summary of Previous Ve rsions
Version
#Effective Date Originator Summary
1.0 Current Guy Singh New Document
2. PURPOSE
This procedure descri bes the method to quantitate Ig Gantibody levels to subunit 1 ( S1) of
the spike (S) protein of severe acute respirator y disease coro navirus 2 (SARS-CoV-2). The
assay method measures IgGantibody levels for the S1protein in human serum.
3.SCOPE
Personnel in Vacci ne Research & Developme nt (VRD) that perform the s ingle-plex
SARS-CoV-2 S1 IgGdLIAin regulated testing are required to follow this test method.
Table 2.Vaccine Research Functional Units
Functional Units Location
Vaccine Re search & Development Pearl River
4.GLOSSARY
Table3.Terms and Definitions
Term Definition
Ag Antigen
Assay Plate The 96-well flat-bottom opaque plate us ed to perform the as say.
Batch
Beads A term interchangeable with microspheres .
COV19 Coronavirus Di sease 2019
Dilution Plate,
dLIA Direct Luminex Immunoassay
Expiration Date Expiration dates of r eagents will be assign ed based on the av ailable stability data.
Specific expi ration dates may be recorded on reagen t labels, or within lab oratory
notebooks or documentation workboo ks referenced by the reagent label.
IgG Immunoglobulin G
Labware LIMS TheLabware brand of a Lab oratory Information Management System whic h is a
database used to track specimens and their associated tests.
LNB Laboratory Notebook
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FDA-CBER-2021-5683-1072940
FDA-CBER-2021-5683-1072941
VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
Doc. Alias: NA
PFIZER CO NFIDENTIAL
Page 5Table4.Roles and Responsi bilities
Role Responsibilities
Analyst Performs the test method foll owing the procedures described in this SOP.
Completesdocumentation of the w ork perform ed and any deviations that occurred .
Follows applicable depar tmental SOPs regarding safety, equipme nt use and
documentation practices .
Initiates LDRs .
Notifies superviso r of any at ypical events.
Supervisor or
designeeReviews and signs documentation.
Ensuresthat analysts have been trained on appropriate SOPs.
Ensuresthat equipment and instruments ha ve been prop erly calibrated and maintained.
Ensures LDRs are initiated and proper ly investigated.
7.SAFETY
Biosafety level 2 precautions should be taken when handling human sera. For current
guidelines refer to the CD C/NIH Biosafe ty in Microbiological and Biomedical
Laboratories Manual (BMBL), 5th Ed., 2009:
http://www.cdc.gov/biosafe ty/publications/bmb l5/index.htm.
Personnel must be trained on current labora torysafety procedures and made aware of the
Safety Data Shee ts (SDS) for chemicals being used, bef ore performi ngthis procedure.
For SDS information, refer to link at http:// .
All laboratory work is to be carried ou t incompliance with Pfizer safet y policies. For
general lab oratory safety guidelines consult the Pearl River Environmental Health and
Safety Laboratory Manual located at:
http:/ .
Lab coats, safet yglasses and disposable gloves must be worn at all times when handling
human specimens .
8.MATERIALS/E QUIPMENT
Allequipment and materials used in regulated testing must co nform to cu rrent departmental
guidelines for calib ration, maintenance and qualification.
8.1.Equipment
Bio-Plex Reader, Bio -Rad Cat. # orequivalent
Platform Shaker, or equivale nt
Scientific freezers, -80°C ±15°C and -20°C -15/+5°C
Scientific ref rigerator,2 to 8°C
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FDA-CBER-2021-5683-1072942
VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
Doc. Alias: NA
PFIZER CO NFIDENTIAL
Page 6 (magnetic bead) plate washer or equiva lent
Alarm timer
Single channel pipettes, various sizes
Multi-channel pipettes, manual and electronic, various si zes
Pipetting Device, or equivalent
Vortex m ixer
Nutating mixer
8.2.Materials
96-well flat bottom opaque white plates, or equivalent
Polypropylene pipette tips, various sizes
Sterile disposable serological plastic p ipettes, various sizes
Disposable polypropylene tubes or container s, various sizes
Disposable light protective amber pol ypropylene centrifuge tubes or containers, va rious
sizes
Aluminum sealing tape for 96 well plates
Reagent Reservoir s, various sizes
Polypropylenemicro snap cap tube s
Tube racks
Magnetic separators
Biohazardous waste receptacle
Biohazard sharps waste containers
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FDA-CBER-2021-5683-1072945
FDA-CBER-2021-5683-1072946
VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
Doc. Alias: NA
PFIZER CO NFIDENTIAL
Page 109.2.2.Manual Preparation of Dilution Plates
Figure1. Dilution Plate Diagram
9.2.2.1.Reference Standard
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VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
Doc. Alias: NA
PFIZER CO NFIDENTIAL
Page 119.2.2.2.Unknown Specimenand QCS
9.2.2.3.Samples Requ iring Pre- dilutions
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VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
Doc. Alias: NA
PFIZER CO NFIDENTIAL
Page 129.2.2.4.Dilution Plate Completion
9.3.Preparation of Assay Plates
9.3.1.Robotic Preparat ion of Assay Plates
Referto VR-SOP-LC-11186for assay plate preparation using the
Robot. Continue to Section 9.4to begin a ssay completion steps.
9.3.2.Manual P reparation of Assay Plat es
9.4.Primary Incubation of S1Coated Microspheres with Sera
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VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
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PFIZER CO NFIDENTIAL
Page 139.5. Preparation of PlateWasher
1.Prepare plate washer for use as described in VR -SOP-FE-10887. Record the
activities, as required, in the appropriate equipment logbook .
2.Ensure the Magnetic Bead Plate Adapto r is inserted for mag netic bead plate wash.
9.6.PE-conjugated Se condary Antibody Preparatio n and Incubation
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VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
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Page 149.7.Assay Completion
9.8.Reading Assay Plat es on the Bio- Plex Instrument
1.Prepare the Bio-P lex reader for use as described in VR -SOP-FE-10111. Rec ord the
activities, as required in the appropri ate equipment logbook.
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VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
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PFIZER CO NFIDENTIAL
Page 159.9. Rereading of Assay Plate s Due to Errors
6.Prepare assay plates for disposal by emptying the liquid off the plates. Discard empt
y
assay plates in a Biohazard waste receptacle .
9.10.Electronic Documentation
VR-TM-
10293-FM01 is the assay completion worksheet used w hensample pr eparation
is performed either manually or by automated methods. A n assay completion worksheet
is not required for fully electronic/paperless batches where metadata is recorded in LIMS.
VR-TM-10293-FM02 is the manual sample preparation workshe et used when a utomated
sample preparation is not performed . An assay completio n worksheet is not required for
fully electronic /paperless batches where metadata is recorded in L IMS.
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FDA-CBER-2021-5683-1072953
VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
Doc. Alias: NA
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Page 1711.REFERENCES
Table 5.General References
Document Title
VR-SOP-QU-10004 Document ation Pract ices in Vacci ne Research
VR-GWP-10041 Metadata Entry Procedure in LabWare LIMS for Luminex Immunoassays
VR-SOP-QU-10726 Laboratory Devi ation Rep ort
VR-SOP-LC-10788 Labeling and Traceability of Reagents and Solutions
Table 6.Form References
Form Title
VR-TM-10293-FM01 Assay Complet ion Worksheet for SARS-CoV-2S1 IgG dLIA
VR-TM-10293-FM02Manual Sample Preparation Work sheet for SARS-CoV-2 S1 IgGdLIA
VR-SOP-LC-10601-FM14Generic Luminex Assay Data Package Chain of Custody
Table 7. Speci fic References
Document Title
VR-SOP-LC-10222 Procedure for M aking Sample Predilutions with
Robot
VR-SOP-LC-10627 Preparation of Assay Buffers and Solutions for Assays
VR-SOP-LC-11114 DataReview Procedures for Dir ect Luminex I mmunoassays Using Input Files or
LabWare v5 LIMS
VR-SOP-LC-11120 Data Review Procedures f or Direct Luminex Immunoassays in LIM S v6.
VR-SOP-LC-11186 Running the Method Using Robot
VR-SOP-LC-11190 Standard Operating Procedure f or Running Predilute Sample Method using
Robot
VR-SOP-LC-11295 Preparationof and Evaluation of Microspheres for use in Direct
Luminex Assays
VR-RGR-RS-10747 Preparation of Reference Standard Seru m and Quality Control Samples for
SARS-CoV-2 S1 and RBD Direc t Luminex Immunoass ays
VR-SOP-FE-10111 Bio-Plex System Operation and Maintenance
VR-SOP-LC-10586 Liquid Handling Techniques for Regulated Laboratory P rocedures
VR-SOP-LC-10601 Data Package Chain of Custody
VR-SOP-LC-10774 Specimen Ma nagement Record Using LabWare LIMS
VR-SOP-FE-10887 Operation, Maintenance and Per formance Verificati on of
Microplate Washers
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FDA-CBER-2021-5683-1072954
VACCINE RESEA RCH TEST METHOD PEARL RIVER, NY
TITLE:Single-plex Luminex Assay for Qu antitation of
IgGAntibodies toSARS-CoV-2 S1 Proteinin Human
SerumDoc Number: VR-TM-10293 Version: 1.0
Doc. Alias: NA
PFIZER CO NFIDENTIAL
Page 1812.DOCUMENT VERSION MOD IFICATIONS
12.1.CRIF Number: VR-CRIF-20-14611
Table 8. Detailed Changes
List detailed changes for document( s)
Includesection number(s) for eachList rationale for each chan ge
New NA
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FDA-CBER-2021-5683-1072955
Document Approval Record
Document Name:
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Signed By: Date(GMT) Signing Capacity
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